311ccm will be tooo small for turbo aplication. I was unning on 880ccm on EVO IX using 100RON and now i am using 1700ccm on E85

on JZ engine.
EMU is very good ecu and has no problém with such big injectors, and is still able to work with very acuratly AFR.
If i know , there is injector offset in Fueling-Injector phase table now in EMU, and you can change the injection angle changing the injection order.
My simply calculation about injectors :
on 6 cilinder engine using gasoline works pretty easy ...... ccm = estimate HP
so your 311ccm are good for 311/6*4 = 207HP (on 85% DUTY)
and your 400ccm will be good for 400/6*4 = 267HP
i know there will be also limitation in the biggest torque etc.... but my calculation is just a rough guess
you can also turn fuel pressure higher, but if you change it from 3 to 4BAR , you will probably gain less then 10% flow of the injectors.
Wiring ?
I always recommend all new wiring. If i made new wiring, never had issues. Good flexible shielded cable for critical sensors, like MAG sensors on crank, and enough diameter for high current devices like coils, and you will be happy.
Your attachements are marked as "-kopie" ad this is Czech word. Where are you from ?